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Table 2 Transcription of protein coding genes in the M. hypopitys MON1-VOLR plastid genome

From: The loss of photosynthetic pathways in the plastid and nuclear genomes of the non-photosynthetic mycoheterotrophic eudicot Monotropa hypopitys

Gene

Position (start-end)

FPKM value

rpl32

195-1

4424

rpl23

650-949

36165

rpl2

954-1349, 2032-2460a

66036

rpl22

3007-3399

71151

rps3

3465-4136

92022

rpl16

5308-5718

98751

rpl14

5817-6185

86138

rps8

6383-6781

75817

infA

6916-7155

83289

rpl36

7278-7391

105328

rps11

7519-7920

27030

rpl33

8642-8845

29301

rps18

9060-9386

36275

rpl20

9855-9517

29237

rps12

28675-28433, 10730-10617b

97942

rps4

12232-12843

56329

rps14

13291-13593

89745

clpP

17294-18169

102855

accD

19448-21352

261840

rps2

22894-23646

37404

matK

24380-25930

4868

rps7

27814-27347

155291

  1. a two exons
  2. b two exons, trans-splicing
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BMC Plant Biology

ISSN: 1471-2229

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